PPDB

 The Plant Proteome Database

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AT1G47720.1   Primosome PriB/single-strand DNA-binding protein
Lab Annot. OSB1 (ORGANELLAR SINGLE-STRANDED); single-stranded DNA binding
Mapman: 28.99 DNA.unspecified
Curated Location mitochondria (Pubmed: 17189341 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20010.2 11Arabidopsis thaliana2E-1621527476 (5)_
AT4G20010.1 11Arabidopsis thaliana2E-1621527476 (5)_
AT5G44785.1 11Arabidopsis thaliana3E-1520730473 (0)M
Os03g43420.1 7Oryza sativa3E-2822132487 (7)C
Os03g41530.4 7Oryza sativa1E-197058740 (0)_
Os01g72049.1 7Oryza sativa9E-1120528440 (0)M
v1_GRMZM2G128432_P01 4a53Zea mays3E-28232304960 (60)C
Zm00001eb218850_P001 agpv5Zea mays3E-2823230490 (0)C
GRMZM2G128432_P01 3.21Zea mays3E-282323049106 (85)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SSB(1) tRNA_anti-codon(1)
TargetP: Chloroplast (Class 5 C0.359; M0.336; S0.009; _0.085)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 261 aa (-cTP 247)
Molecular Weight 30.56 kDA(-cTP 28.93)
PI 9.34(-cTP 9.16)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 18538804(apoplast)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help