PPDB

The Plant Proteome Database

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AT1G47710.1   Serine protease inhibitor (SERPIN) family protein

Lab Annot. Serine protease inhibitor 1 (SERPIN1 or SRP1)
Mapman: 29.5.5.10.3* protein.degradation.serine protease.inhibitor.ID-i4
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47710.2 11Arabidopsis thaliana03911001000 (0)M
AT3G45220.1 11Arabidopsis thaliana3E-15339757700 (0)_
AT2G25240.1 11Arabidopsis thaliana3E-14939155700 (0)_
Os03g41438.1 7Oryza sativa3E-13440251690 (0)M
Os03g41419.1 7Oryza sativa3E-99257637624 (24)M
Os11g12520.1 7Oryza sativa3E-8939940580 (0)_
Zm00001eb219170_P001 agpv5Zea mays5E-13839351700 (0)C
v1_GRMZM2G066996_P01 4a53Zea mays5E-138393517049 (49)C
GRMZM2G066996_P01 3.21Zea mays5E-138393517070 (42)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Serpin(1)
TargetP: Cytoplasm (Class 3 C0.098; M0.059; S0.023; _0.678)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 391 aa (-cTP 313)
Molecular Weight 42.64 kDA(-cTP )
PI 4.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
19200160(flower-stage 12)
19546170(mature pollen grains)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


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