PPDB

PPDB	The Plant Proteome Database

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AT1G47570.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47570.2 11 Arabidopsis thaliana 0 442 100 100 0 (0) _
AT1G47570.3 11 Arabidopsis thaliana 0 400 100 100 0 (0) _
Os11g07450.2 7 Oryza sativa 6E-169 455 51 67 0 (0) C
Os11g07450.1 7 Oryza sativa 4E-162 485 48 63 0 (0) C
Zm00001eb200940_P003 agpv5 Zea mays 3E-168 469 50 68 0 (0) C
GRMZM2G000014_P04 3.21 Zea mays 3E-168 469 50 68 0 (0) C
Zm00001eb200940_P001 agpv5 Zea mays 5E-166 468 50 67 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Anti-TRAP(2) Baculo_IE-1(1) DUF1244(1) zf-C3HC4(2) zf-C3HC4_2(3) zf-C3HC4_3(2) z
TargetP:	Cytoplasm (Class 2 C0.235; M0.096; S0.060; _0.850)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	466 aa (-cTP 462)
Molecular Weight	53.10 kDA(-cTP )
PI	7.54(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data