PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G47560.1   exocyst complex component sec3B
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47550.1 11Arabidopsis thaliana0887969813 (12)_
AT1G47550.2 11Arabidopsis thaliana0888969713 (12)_
Os03g42750.1 7Oryza sativa0896728318 (18)_
Os03g42750.2 7Oryza sativa0860738318 (18)_
Os11g17600.3 7Oryza sativa089266820 (0)_
GRMZM2G099056_P01 3.21Zea mays089773841 (1)_
v1_GRMZM2G099056_P01 4a53Zea mays089773841 (1)_
Zm00001eb051220_P001 agpv5Zea mays089773840 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CENP-F_leu_zip(2) HMG_CoA_synt_N(1) Sec3-PIP2_bind(1) Sec3_C(2) Vps52(1)
TargetP: Cytoplasm (Class 4 C0.445; M0.021; S0.012; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 887 aa (-cTP 816)
Molecular Weight 99.92 kDA(-cTP )
PI 5.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2191Detail        [A. thaliana] plastid stroma stromaP3-trap-strepII 40

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help