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AT1G47550.1 exocyst complex component sec3A

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47550.2 11 Arabidopsis thaliana 0 888 99 99 13 (12) _
AT1G47560.1 11 Arabidopsis thaliana 0 887 96 98 1 (1) _
Os03g42750.1 7 Oryza sativa 0 896 74 84 18 (18) _
Os03g42750.2 7 Oryza sativa 0 860 75 85 18 (18) _
Os11g17600.3 7 Oryza sativa 0 892 68 84 0 (0) _
GRMZM2G099056_P01 3.21 Zea mays 0 897 75 85 1 (1) _
v1_GRMZM2G099056_P01 4a53 Zea mays 0 897 75 85 1 (1) _
Zm00001eb051220_P001 agpv5 Zea mays 0 897 75 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CENP-F_leu_zip(2) DUF2371(1) Sec3-PIP2_bind(1) Sec3_C(2) Vps52(2)
TargetP:	Cytoplasm (Class 3 C0.377; M0.019; S0.015; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	887 aa (-cTP 816)
Molecular Weight	100.06 kDA(-cTP )
PI	5.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1557	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2191	Detail								[A. thaliana]	plastid stroma stroma	P3-trap-strepII 40

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data