PPDB

The Plant Proteome Database

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AT1G47540.1   Scorpion toxin-like knottin superfamily protein

Lab Annot. trypsin protease inhibitor protein
Mapman: 29.5.5.10.5* protein.degradation.serine protease.inhibitor.JD-i18
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47540.2 11Arabidopsis thaliana2E-679998985 (3)S
AT2G43520.1 11Arabidopsis thaliana3E-389066778 (2)S
AT2G43535.1 11Arabidopsis thaliana1E-379264772 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Gamma-thionin(1) Toxin_3(1)
TargetP: Secreted (Class 1 C0.011; M0.015; S0.988; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 98 aa (-cTP 65)
Molecular Weight 10.99 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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