PPDB

The Plant Proteome Database

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AT1G47530.1   MATE efflux family protein

Lab Annot. ripening-responsive protein, putative
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47530.2 11Arabidopsis thaliana03921001000 (0)_
AT1G12950.1 11Arabidopsis thaliana045558742 (2)_
AT5G38030.1 11Arabidopsis thaliana049454700 (0)_
Os08g43654.1 7Oryza sativa6E-17945057730 (0)_
Os03g37490.1 7Oryza sativa8E-16045651690 (0)_
Os03g42830.1 7Oryza sativa2E-15946350670 (0)S
GRMZM2G481440_P02 3.21Zea mays045357730 (0)_
Zm00001eb202870_P001 agpv5Zea mays045357730 (0)_
v1_GRMZM2G027016_P01 4a53Zea mays3E-17246452700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MatE(3)
TargetP: Cytoplasm (Class 2 C0.101; M0.047; S0.046; _0.889)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 12 TMs
TAT position:
Length 484 aa (-cTP 394)
Molecular Weight 52.42 kDA(-cTP )
PI 6.75(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
19525416(leaf (wt and clpr4-1 mutant))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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