PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G47500.1 RNA-binding protein 47C'

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47490.1 11 Arabidopsis thaliana 0 436 90 93 2 (2) _
AT1G47500.2 11 Arabidopsis thaliana 0 309 99 99 0 (0) _
AT1G47490.2 11 Arabidopsis thaliana 0 312 86 91 2 (2) _
Os09g28810.1 7 Oryza sativa 2E-148 337 66 76 6 (6) _
Os04g37690.1 7 Oryza sativa 6E-133 331 59 75 4 (4) C
Os03g37270.1 7 Oryza sativa 6E-123 336 57 71 22 (22) _
Zm00001eb315240_P002 agpv5 Zea mays 5E-144 390 59 70 0 (0) _
v1_GRMZM2G467907_P01 4a53 Zea mays 5E-142 390 60 70 3 (3) _
GRMZM2G467907_P01 3.21 Zea mays 5E-142 390 60 70 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4078(1) Nup35_RRM_2(1) OB_RNB(2) PHM7_cyt(3) RRM_1(3) RRM_3(2) RRM_7(3) RRM_o
TargetP:	Cytoplasm (Class 2 C0.223; M0.033; S0.109; _0.860)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	434 aa (-cTP 399)
Molecular Weight	48.63 kDA(-cTP )
PI	5.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data