PPDB

PPDB	The Plant Proteome Database

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AT1G47340.1 F-box and associated interaction domains-containing protein

Lab Annot.

F-box and associated interaction domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47340.3 11 Arabidopsis thaliana 0 428 100 100 0 (0) C
AT1G47340.2 11 Arabidopsis thaliana 0 428 100 100 0 (0) C
AT1G47350.1 11 Arabidopsis thaliana 6E-174 384 63 77 0 (0) _
Os09g20650.1 7 Oryza sativa 5E-14 306 26 42 0 (0) _
Os09g20650.2 7 Oryza sativa 7E-14 306 26 42 0 (0) _
Os09g27660.3 7 Oryza sativa 1E-11 348 25 40 0 (0) M
GRMZM2G047777_P01 3.21 Zea mays 4E-14 265 28 41 0 (0) _
Zm00001eb101520_P001 agpv5 Zea mays 4E-14 265 28 41 0 (0) _
Zm00001eb101520_P002 agpv5 Zea mays 4E-14 265 28 41 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BAAT_C(1) DUF5737(1) F-box(1) F-box-like(1) FBA_1(1) FBA_3(1) SoxZ(1)
TargetP:	Chloroplast (Class 5 C0.358; M0.351; S0.007; _0.112)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	459 aa (-cTP 425)
Molecular Weight	53.45 kDA(-cTP 49.74)
PI	5.64(-cTP 5.25)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data