PPDB

PPDB	The Plant Proteome Database

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AT1G47056.1 VIER F-box protein 1

Lab Annot.

VIER F-box proteine 1
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G07400.1 11 Arabidopsis thaliana 0 514 59 71 1 (1) _
AT5G67250.1 11 Arabidopsis thaliana 6E-180 524 54 69 0 (0) _
AT3G50080.1 11 Arabidopsis thaliana 5E-165 522 50 67 0 (0) _
Os04g42670.1 7 Oryza sativa 2E-140 481 46 64 0 (0) C
Os03g45910.1 7 Oryza sativa 1E-17 136 38 55 0 (0) _
Os11g42160.1 7 Oryza sativa 2E-16 315 30 44 0 (0) _
Zm00001eb307130_P001 agpv5 Zea mays 3E-142 425 54 72 0 (0) M
GRMZM2G067460_P01 3.21 Zea mays 5E-142 425 54 72 0 (0) C
v1_GRMZM2G067460_P01 4a53 Zea mays 5E-142 425 54 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) F-box_5(2) LRR_4(9) LRR_6(7) LRR_8(5)
TargetP:	Chloroplast (Class 5 C0.599; M0.418; S0.009; _0.141)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	518 aa (-cTP 432)
Molecular Weight	56.50 kDA(-cTP 46.68)
PI	8.93(-cTP 8.70)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data