PPDB

The Plant Proteome Database

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AT1G45688.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G45688.2 11Arabidopsis thaliana2E-16623896970 (0)C
AT5G42860.1 11Arabidopsis thaliana1E-15834477840 (0)C
AT2G41990.1 11Arabidopsis thaliana5E-5434238520 (0)_
Os04g59330.1 7Oryza sativa4E-11234255662 (2)C
Os06g06780.1 7Oryza sativa3E-7135143566 (6)C
Os04g35130.1 7Oryza sativa8E-6836344570 (0)_
Zm00001eb076240_P001 agpv5Zea mays2E-9434352620 (0)C
v1_GRMZM2G081957_P02 4a53Zea mays2E-9434352624 (4)C
GRMZM2G081957_P02 3.21Zea mays2E-9434352626 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(2)
TargetP: Chloroplast (Class 2 C0.846; M0.043; S0.007; _0.110)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 342 aa (-cTP 309)
Molecular Weight 37.20 kDA(-cTP 33.59)
PI 9.90(-cTP 9.83)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help