PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G45100.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41690.1 11 Arabidopsis thaliana 1E-140 557 45 59 0 (0) _
AT5G41690.3 11 Arabidopsis thaliana 1E-140 557 45 59 0 (0) _
AT5G41690.2 11 Arabidopsis thaliana 1E-140 557 45 59 0 (0) _
Os04g42600.2 7 Oryza sativa 4E-17 386 21 45 14 (14) S
Os04g42600.1 7 Oryza sativa 4E-17 386 21 45 14 (14) S
Os08g22354.1 7 Oryza sativa 2E-15 385 23 42 34 (34) _
Zm00001eb078040_P002 agpv5 Zea mays 4E-16 390 21 44 0 (0) S
GRMZM2G013619_P01 3.21 Zea mays 4E-16 383 20 43 22 (19) _
v1_GRMZM2G013619_P01 4a53 Zea mays 4E-16 383 20 43 11 (11) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1866(3) Nup35_RRM(3) Nup35_RRM_2(4) PHM7_cyt(3) RRM_1(4) RRM_3(4) UPF0113(3)
TargetP:	Cytoplasm (Class 3 C0.296; M0.035; S0.041; _0.860)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	497 aa (-cTP 483)
Molecular Weight	55.83 kDA(-cTP )
PI	8.19(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data