PPDB

The Plant Proteome Database

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AT1G44960.1   SNARE associated Golgi protein family

Lab Annot. SNARE associated Golgi protein family
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22850.1 11Arabidopsis thaliana5E-0615827450 (0)_
AT1G03260.1 11Arabidopsis thaliana6E-0623324440 (0)S
Os11g33100.1 7Oryza sativa3E-8923159740 (0)M
v1_GRMZM2G142344_P01 4a53Zea mays2E-8724356724 (4)M
Zm00001eb197910_P001 agpv5Zea mays2E-8724356720 (0)M
GRMZM2G142344_P01 3.21Zea mays2E-8724356724 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2232(2) DUF4064(2) SNARE_assoc(2)
TargetP: Secreted (Class 4 C0.006; M0.130; S0.465; _0.248)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 4 TMs
TAT position:
Length 261 aa (-cTP 242)
Molecular Weight 28.22 kDA(-cTP )
PI 9.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help