PPDB

 The Plant Proteome Database

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AT1G44770.1   elongation factor
Lab Annot. unknown protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G44770.2 11Arabidopsis thaliana027199992 (2)_
AT5G49710.3 11Arabidopsis thaliana5E-1412131550 (0)_
AT5G49710.1 11Arabidopsis thaliana5E-1412131550 (0)_
Os03g49490.1 7Oryza sativa4E-5426539580 (0)_
Os03g49490.2 7Oryza sativa1E-5227237540 (0)_
Os02g54080.2 7Oryza sativa2E-1117922480 (0)C
v1_GRMZM2G031022_P01 4a53Zea mays2E-5027334570 (0)_
GRMZM2G031022_P02 3.21Zea mays2E-5027334570 (0)_
GRMZM2G031022_P01 3.21Zea mays2E-5027334570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BRE1(1)
TargetP: Cytoplasm (Class 2 C0.060; M0.058; S0.133; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 271 aa (-cTP 255)
Molecular Weight 30.76 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2253Detail       seedlings [A. thaliana] total tissue atg5
2272Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help