PPDB

The Plant Proteome Database

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AT1G44446.1   Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein

Lab Annot. chlorophyll a oxygenase (CAO)
Mapman: 19.16 tetrapyrrole synthesis.chlorophyll b synthase
Curated Location envelope-inner (Pubmed: 23198870 16537436 18431481 )
thylakoid (Pubmed: 23198870 16537436 18431481 )

TAIR curated location: chloroplast & chloroplast inner membrane & thylakoid membrane15805480,16537436
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G44446.2 11Arabidopsis thaliana048310010036 (7)C
AT1G44446.4 11Arabidopsis thaliana04341001000 (0)_
AT1G44446.3 11Arabidopsis thaliana0386999935 (6)C
Os10g41780.4 7Oryza sativa051473850 (0)_
Os10g41780.1 7Oryza sativa051973850 (0)M
Os10g41780.2 7Oryza sativa051473850 (0)M
Zm00001eb140370_P002 agpv5Zea mays053870810 (0)M
GRMZM2G038487_P01 3.21Zea mays0464718314 (14)M
Zm00001eb362510_P003 agpv5Zea mays046471830 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3461(1) Lebercilin(1) PaO(1) Rieske(1) VanA_C(2)
TargetP: Chloroplast (Class 2 C0.828; M0.113; S0.179; _0.080)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 536 aa (-cTP 500)
Molecular Weight 60.33 kDA(-cTP 56.42)
PI 7.96(-cTP 6.52)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help