PPDB

 The Plant Proteome Database

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AT1G44080.1   F-box SKIP23-like protein (DUF295)
Lab Annot.
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25750.2 11Arabidopsis thaliana1E-11737052670 (0)_
AT4G35733.1 11Arabidopsis thaliana9E-11635252670 (0)_
AT2G26160.1 11Arabidopsis thaliana9E-11533755691 (1)_
Os12g05709.1 7Oryza sativa2E-0836021360 (0)_
Os12g05609.1 7Oryza sativa2E-0836021360 (0)_
Os09g22470.1 7Oryza sativa8E-0611131470 (0)_
v1_GRMZM2G144615_P02 4a53Zea mays6E-0732924390 (0)_
Zm00001eb122000_P002 agpv5Zea mays6E-0732924390 (0)_
GRMZM2G144615_P02 3.21Zea mays6E-0732924390 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF295(2) DUF4058(2)
TargetP: Cytoplasm (Class 4 C0.140; M0.048; S0.014; _0.539)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 347 aa (-cTP 330)
Molecular Weight 40.11 kDA(-cTP )
PI 8.55(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1043Detail       leaf [A. thaliana] plastid - coIP thylakoid membrane 
1091Detail        [A. thaliana] R4Strep Complemented

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help