PPDB

The Plant Proteome Database

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AT1G43860.1   sequence-specific DNA binding transcription factor

Lab Annot. sequence-specific DNA binding transcription factors
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G43860.2 11Arabidopsis thaliana03251001000 (0)_
Os08g01620.1 7Oryza sativa6E-16537160770 (0)M
Os08g01620.2 7Oryza sativa6E-16537160770 (0)M
Zm00001eb260230_P001 agpv5Zea mays6E-16337060750 (0)M
GRMZM6G923769_P01 3.21Zea mays8E-11821275880 (0)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4629(1) SBDS(1) SBDS_C(1)
TargetP: Mitochondria (Class 5 C0.118; M0.516; S0.038; _0.409)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 349)
Molecular Weight 42.23 kDA(-cTP )
PI 6.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help