PPDB

PPDB	The Plant Proteome Database

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AT1G43850.1 SEUSS transcriptional co-regulator

Lab Annot.

transcriptional co-regulator of AGAMOUS
Mapman: 27.3.99 RNA.regulation of transcription.C2H2 zinc finger family; 27.3.11 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G43850.2 11 Arabidopsis thaliana 0 877 100 100 0 (0) C
AT4G25515.1 11 Arabidopsis thaliana 4E-98 394 44 62 0 (0) C
AT4G25520.1 11 Arabidopsis thaliana 6E-97 281 53 72 0 (0) C
Os11g10070.1 7 Oryza sativa 5E-102 683 40 49 0 (0) C
Os06g03600.2 7 Oryza sativa 1E-99 357 45 64 0 (0) C
Os06g03600.1 7 Oryza sativa 1E-99 357 45 64 0 (0) C
Zm00001eb112550_P001 agpv5 Zea mays 1E-174 618 51 61 0 (0) C
GRMZM2G048680_P01 3.21 Zea mays 1E-174 618 51 61 0 (0) C
v1_GRMZM2G048680_P01 4a53 Zea mays 1E-174 618 51 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LIM_bind(2)
TargetP:	Chloroplast (Class 5 C0.717; M0.031; S0.002; _0.638)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	877 aa (-cTP 827)
Molecular Weight	96.23 kDA(-cTP 91.28)
PI	9.20(-cTP 9.27)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
20813957(SUMO proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data