PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G43800.1   Plant stearoyl-acyl-carrier-protein desaturase family protein
Lab Annot.
Mapman: 11.1.15 lipid metabolism.FA synthesis and FA elongation.ACP desaturase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43710.1 11Arabidopsis thaliana03596781449 (310)C
AT2G43710.2 11Arabidopsis thaliana03586881461 (323)C
AT3G02630.1 11Arabidopsis thaliana9E-1803496980171 (122)C
Os01g65830.1 7Oryza sativa034073850 (0)M
Os01g69080.1 7Oryza sativa3E-179348688046 (46)M
Os04g31070.1 7Oryza sativa7E-17834868807 (7)C
GRMZM2G316362_P01 3.21Zea mays038369790 (0)C
v1_GRMZM2G316362_P01 4a53Zea mays038369790 (0)C
Zm00001eb366200_P001 agpv5Zea mays034374850 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ACP_PD(2) DUF1580(1) FA_desaturase_2(1) Rubrerythrin(2)
TargetP: Mitochondria (Class 5 C0.426; M0.430; S0.020; _0.061)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 391 aa (-cTP 353)
Molecular Weight 44.16 kDA(-cTP )
PI 6.10(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17828791(total leaf)
17432890(leaf total membranes)
19334764(plasma membrane (cell culture))
20706207(cell cycle interactome (cell culture))
21533090(plasmodesmata-crude)
21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help