PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G43790.1   tracheary element differentiation-related 6

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48920.1 11Arabidopsis thaliana3E-119042680 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cadherin_C_2(1) DUF4094(1) DUF4718(1) EphA2_TM(1) Insulin_TMD(1) LapA_dom(2) MFS
TargetP: Cytoplasm (Class 3 C0.087; M0.308; S0.087; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 116 aa (-cTP 95)
Molecular Weight 13.01 kDA(-cTP )
PI 7.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help