PPDB

PPDB	The Plant Proteome Database

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AT1G43700.1 VIRE2-interacting protein 1

Lab Annot.

VIRE2-interacting protein 1
Mapman: 31.1 cell.organisation

Curated Location

TAIR curated location: nucleus15824315

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G06070.1 11 Arabidopsis thaliana 5E-49 191 53 66 0 (0) C
AT2G31370.5 11 Arabidopsis thaliana 6E-48 183 54 66 0 (0) C
AT2G31370.7 11 Arabidopsis thaliana 1E-47 183 54 66 0 (0) C
Os12g06520.1 7 Oryza sativa 1E-64 274 50 60 0 (0) M
Os11g06170.2 7 Oryza sativa 9E-50 150 68 80 0 (0) _
Os07g48180.1 7 Oryza sativa 6E-47 165 54 68 0 (0) C
Zm00001eb092090_P001 agpv5 Zea mays 3E-69 330 46 55 0 (0) _
v1_GRMZM2G118393_P01 4a53 Zea mays 3E-69 330 46 55 0 (0) _
GRMZM5G821024_P01 3.21 Zea mays 3E-69 330 46 55 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ADIP(1) APG6_N(1) Atg14(1) ATG16(1) bZIP_1(3) bZIP_2(3) bZIP_Maf(2) CENP-H(1) Ce
TargetP:	Cytoplasm (Class 3 C0.231; M0.123; S0.040; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	341 aa (-cTP 257)
Molecular Weight	37.79 kDA(-cTP )
PI	6.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data