PPDB

The Plant Proteome Database

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AT1G43580.1   Sphingomyelin synthetase family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g34620.1 7Oryza sativa041266790 (0)M
Os02g33830.1 7Oryza sativa1E-16135961750 (0)S
Zm00001eb062160_P001 agpv5Zea mays041263780 (0)M
GRMZM2G047365_P01 3.21Zea mays041263780 (0)M
v1_GRMZM2G047365_P01 4a53Zea mays041263780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3881(1) PAP2(3) PAP2_C(3) PHO4(2)
TargetP: Cytoplasm (Class 5 C0.011; M0.423; S0.036; _0.572)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 421 aa (-cTP 383)
Molecular Weight 47.12 kDA(-cTP )
PI 9.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help