PPDB

PPDB	The Plant Proteome Database

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AT1G43090.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G43100.1 11 Arabidopsis thaliana 0 444 98 99 0 (0) S
AT1G43080.1 11 Arabidopsis thaliana 0 396 98 99 0 (0) S
AT2G40310.1 11 Arabidopsis thaliana 0 396 88 92 0 (0) S
Os06g35320.1 7 Oryza sativa 5E-103 364 47 59 0 (0) S
Os06g35370.1 7 Oryza sativa 5E-103 364 47 59 0 (0) S
Os06g40890.1 7 Oryza sativa 1E-96 368 42 58 0 (0) S
GRMZM2G160526_P01 3.21 Zea mays 2E-103 406 42 57 14 (14) S
Zm00001eb275900_P001 agpv5 Zea mays 2E-103 406 42 57 0 (0) S
v1_GRMZM2G160526_P01 4a53 Zea mays 2E-103 406 42 57 13 (11) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_28(1) Pectate_lyase_3(2) Peptidase_M43(1)
TargetP:	Secreted (Class 2 C0.146; M0.060; S0.826; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	444 aa (-cTP 425)
Molecular Weight	49.07 kDA(-cTP )
PI	9.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data