PPDB

PPDB	The Plant Proteome Database

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AT1G43080.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G43090.1 11 Arabidopsis thaliana 0 396 98 99 0 (0) S
AT1G43100.1 11 Arabidopsis thaliana 0 396 98 99 0 (0) S
AT2G40310.1 11 Arabidopsis thaliana 0 404 88 93 0 (0) S
Os06g35320.1 7 Oryza sativa 1E-102 372 45 58 0 (0) S
Os06g35370.1 7 Oryza sativa 1E-102 372 45 58 0 (0) S
Os08g23790.1 7 Oryza sativa 1E-97 376 42 60 0 (0) S
GRMZM2G160526_P01 3.21 Zea mays 2E-102 414 41 56 14 (14) S
Zm00001eb275900_P001 agpv5 Zea mays 2E-102 414 41 56 0 (0) S
v1_GRMZM2G160526_P01 4a53 Zea mays 2E-102 414 41 56 13 (11) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_28(1) Pectate_lyase_3(2) Peptidase_M43(1)
TargetP:	Secreted (Class 3 C0.217; M0.061; S0.769; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	404 aa (-cTP 344)
Molecular Weight	44.24 kDA(-cTP )
PI	9.02(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data