PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G43040.1   SAUR-like auxin-responsive protein family
Lab Annot.
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G43040.2 11Arabidopsis thaliana3E-741041001000 (0)M
AT5G42410.1 11Arabidopsis thaliana4E-419366840 (0)M
AT4G34800.1 11Arabidopsis thaliana6E-107536620 (0)M
Os02g05060.1 7Oryza sativa1E-076435590 (0)M
Os09g32984.1 7Oryza sativa5E-076934530 (0)M
Os04g51890.1 7Oryza sativa7E-077035510 (0)_
GRMZM2G466908_P01 3.21Zea mays3E-076636570 (0)_
v1_GRMZM2G466908_P01 4a53Zea mays3E-076636570 (0)_
Zm00001eb272840_P001 agpv5Zea mays3E-076636570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Auxin_inducible(1) DUF3342(1) PapC_C(1)
TargetP: Mitochondria (Class 3 C0.027; M0.746; S0.055; _0.193)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 104 aa (-cTP 97)
Molecular Weight 12.08 kDA(-cTP )
PI 6.03(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help