PPDB

The Plant Proteome Database

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AT1G42480.3   TLR4 regulator/MIR-interacting MSAP protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G42480.1 11Arabidopsis thaliana1E-8816684892 (2)S
AT1G42480.2 11Arabidopsis thaliana7E-4511276830 (0)S
Os02g02524.1 7Oryza sativa2E-34123497113 (13)S
Zm00001eb209390_P002 agpv5Zea mays2E-3412351700 (0)_
Zm00001eb209390_P001 agpv5Zea mays3E-3412351700 (0)S
v1_GRMZM2G150193_P02 4a53Zea mays3E-34123517013 (13)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3456(1) DUF5327(1) SapB_1(2)
TargetP: Secreted (Class 1 C0.049; M0.007; S0.959; _0.063)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 182 aa (-cTP 155)
Molecular Weight 20.22 kDA(-cTP )
PI 4.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help