PPDB

The Plant Proteome Database

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AT1G42480.1   TLR4 regulator/MIR-interacting MSAP protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G42480.3 11Arabidopsis thaliana2E-9616684891 (1)S
AT1G42480.2 11Arabidopsis thaliana6E-78111991000 (0)S
Os02g02524.1 7Oryza sativa3E-58144597813 (13)S
Zm00001eb209390_P001 agpv5Zea mays1E-5816061770 (0)S
v1_GRMZM2G150193_P02 4a53Zea mays1E-58160617713 (13)S
GRMZM2G150193_P02 3.21Zea mays1E-58160617712 (12)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3456(1) DUF5327(1) ER(1)
TargetP: Secreted (Class 1 C0.033; M0.009; S0.974; _0.083)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 182 aa (-cTP 155)
Molecular Weight 20.57 kDA(-cTP )
PI 4.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help