PPDB

The Plant Proteome Database

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AT1G42440.1   pre-rRNA-processing TSR1-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06720.2 11Arabidopsis thaliana1E-1425624450 (0)_
AT1G06720.1 11Arabidopsis thaliana2E-1425624454 (1)_
AT1G06720.3 11Arabidopsis thaliana8E-0820527430 (0)_
Os11g19250.1 7Oryza sativa079863780 (0)M
Os03g21530.1 7Oryza sativa1E-1723927473 (3)_
Zm00001eb266050_P001 agpv5Zea mays079461780 (0)M
GRMZM2G161285_P01 3.21Zea mays079461784 (4)M
v1_GRMZM2G161285_P01 4a53Zea mays079461784 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AARP2CN(1) RIBIOP_C(1)
TargetP: Mitochondria (Class 4 C0.294; M0.570; S0.004; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 793 aa (-cTP 731)
Molecular Weight 89.46 kDA(-cTP )
PI 6.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help