PPDB

The Plant Proteome Database

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AT1G36980.1   transmembrane 50A-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G36980.2 11Arabidopsis thaliana7E-951351001000 (0)_
Os02g35880.1 7Oryza sativa3E-6813372840 (0)S
Os09g27960.1 7Oryza sativa2E-6613871820 (0)S
Os09g27960.2 7Oryza sativa1E-317771800 (0)S
Zm00001eb100550_P001 agpv5Zea mays4E-6813872830 (0)_
v1_GRMZM2G134430_P02 4a53Zea mays4E-6813872830 (0)_
GRMZM2G134430_P02 3.21Zea mays4E-6813872830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ABC2_membrane_3(1) DUF5472(1) UPF0220(1)
TargetP: Cytoplasm (Class 3 C0.009; M0.246; S0.407; _0.846)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 135 aa (-cTP 104)
Molecular Weight 14.96 kDA(-cTP )
PI 4.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help