PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G36060.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78080.1 11Arabidopsis thaliana1E-6634046570 (0)_
AT1G22190.1 11Arabidopsis thaliana6E-5631442520 (0)_
AT5G65130.2 11Arabidopsis thaliana7E-4018345620 (0)_
Os03g09170.1 7Oryza sativa3E-4519750600 (0)_
Os08g31580.1 7Oryza sativa2E-4418751620 (0)_
Os02g51670.1 7Oryza sativa2E-4318650610 (0)_
GRMZM2G029323_P01 3.21Zea mays4E-5131541530 (0)_
v1_GRMZM2G029323_P01 4a53Zea mays4E-5131541530 (0)_
Zm00001eb194220_P001 agpv5Zea mays4E-5131541530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(2)
TargetP: Cytoplasm (Class 3 C0.281; M0.110; S0.033; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 291)
Molecular Weight 34.31 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help