PPDB

PPDB	The Plant Proteome Database

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AT1G35625.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G35630.1 11 Arabidopsis thaliana 0 318 82 89 0 (0) S
AT4G09560.1 11 Arabidopsis thaliana 2E-103 313 51 68 0 (0) S
AT1G71980.1 11 Arabidopsis thaliana 7E-102 294 52 71 0 (0) S
Os03g07130.4 7 Oryza sativa 2E-103 287 51 73 0 (0) S
Os03g07130.3 7 Oryza sativa 4E-103 287 51 73 0 (0) S
Os03g07130.2 7 Oryza sativa 1E-102 287 51 73 0 (0) S
Zm00001eb260120_P001 agpv5 Zea mays 7E-101 306 50 69 0 (0) S
Zm00001eb260120_P003 agpv5 Zea mays 7E-101 306 50 69 0 (0) S
v1_GRMZM2G423956_P03 4a53 Zea mays 7E-101 306 50 69 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Defensin_5(1) DUF2306(1) PA(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4
TargetP:	Secreted (Class 1 C0.031; M0.039; S0.936; _0.063)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	318 aa (-cTP 301)
Molecular Weight	35.28 kDA(-cTP )
PI	8.32(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data