PPDB

PPDB	The Plant Proteome Database

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AT1G35620.1 PDI-like 5-2

Lab Annot.

ATPDIL5-2 (PDI-LIKE 5-2); thiol-disulfide exchange intermediate
Mapman: 21.1 redox.thioredoxin

Curated Location

TAIR curated location: cell wall (sensu Magnoliophyta)16287169

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21750.2 11 Arabidopsis thaliana 6E-27 391 27 45 240 (175) S
AT1G21750.1 11 Arabidopsis thaliana 7E-27 391 27 45 312 (220) S
AT1G77510.1 11 Arabidopsis thaliana 6E-23 350 26 46 215 (138) S
Os04g35290.1 7 Oryza sativa 7E-179 387 60 80 5 (5) S
Os02g34530.1 7 Oryza sativa 2E-151 361 59 75 0 (0) S
Os11g09280.1 7 Oryza sativa 1E-22 245 34 48 46 (46) S
Zm00001eb422640_P004 agpv5 Zea mays 0 390 60 80 0 (0) S
GRMZM2G176443_P02 3.21 Zea mays 0 390 60 80 0 (0) S
v1_GRMZM2G176443_P02 4a53 Zea mays 0 390 60 80 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MFS_1(1) Thioredoxin(2) Thioredoxin_2(2) Thioredoxin_6(2) Thioredoxin_7(1) Thior
TargetP:	Secreted (Class 1 C0.003; M0.060; S0.992; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	440 aa (-cTP 419)
Molecular Weight	49.85 kDA(-cTP )
PI	5.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2291	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17151019(vacuole - suspension cell)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21693672(wound-regulated leaf proteome (AOS mutant))
21173025(root proteome)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data