PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G35330.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G09120.1 11 Arabidopsis thaliana 1E-84 341 47 58 0 (0) S
AT4G09130.1 11 Arabidopsis thaliana 6E-83 237 62 70 0 (0) S
AT2G35000.1 11 Arabidopsis thaliana 7E-76 274 51 64 0 (0) S
Os02g52210.1 7 Oryza sativa 8E-36 261 34 49 0 (0) M
Os02g52210.2 7 Oryza sativa 9E-36 261 34 49 0 (0) M
Os09g29310.1 7 Oryza sativa 3E-32 292 32 44 0 (0) S
GRMZM2G082653_P01 3.21 Zea mays 2E-37 283 34 47 1 (1) _
Zm00001eb315600_P001 agpv5 Zea mays 2E-37 283 34 47 0 (0) _
v1_GRMZM2G082653_P01 4a53 Zea mays 2E-37 283 34 47 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1645(1) FANCL_C(2) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Tmpp129(1) Y
TargetP:	Secreted (Class 2 C0.006; M0.086; S0.854; _0.058)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	328 aa (-cTP 302)
Molecular Weight	36.63 kDA(-cTP )
PI	8.98(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data