PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G35230.1   arabinogalactan protein 5

Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G09030.1 11Arabidopsis thaliana1E-104475840 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRCC(1) TFIIA(1)
TargetP: Secreted (Class 5 C0.187; M0.009; S0.357; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 133 aa (-cTP 118)
Molecular Weight 12.60 kDA(-cTP )
PI 8.50(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help