PPDB

 The Plant Proteome Database

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AT1G34575.1   FAD-binding Berberine family protein
Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30710.1 11Arabidopsis thaliana053186910 (0)S
AT1G30720.1 11Arabidopsis thaliana049256712 (1)S
AT1G30730.1 11Arabidopsis thaliana1E-18052851684 (3)S
Os06g35700.1 7Oryza sativa1E-13850644640 (0)S
Os06g35590.1 7Oryza sativa5E-13751743630 (0)S
Os06g35650.1 7Oryza sativa6E-13150643620 (0)S
Zm00001eb277710_P001 agpv5Zea mays1E-14852944620 (0)S
GRMZM2G403076_P01 3.21Zea mays7E-14852944620 (0)_
GRMZM2G080839_P01 3.21Zea mays1E-14250343660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBE(2) FAD_binding_4(1)
TargetP: Secreted (Class 1 C0.042; M0.025; S0.948; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 527 aa (-cTP 493)
Molecular Weight 59.05 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help