PPDB

PPDB	The Plant Proteome Database

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AT1G34550.1 transmembrane protein (DUF616)

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G34550.2 11 Arabidopsis thaliana 0 641 100 100 0 (0) M
AT4G09630.2 11 Arabidopsis thaliana 0 697 70 78 0 (0) M
AT4G09630.1 11 Arabidopsis thaliana 0 713 68 76 0 (0) M
Os11g09170.1 7 Oryza sativa 0 586 54 68 10 (10) C
Os02g51160.1 7 Oryza sativa 8E-112 283 56 72 0 (0) _
Os05g45490.1 7 Oryza sativa 6E-84 305 47 64 0 (0) _
GRMZM2G011404_P02 3.21 Zea mays 0 589 51 62 0 (0) S
v1_GRMZM2G011404_P02 4a53 Zea mays 0 589 51 62 0 (0) S
Zm00001eb168880_P001 agpv5 Zea mays 0 496 59 72 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF616(1)
TargetP:	Cytoplasm (Class 2 C0.106; M0.168; S0.063; _0.778)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	735 aa (-cTP 730)
Molecular Weight	84.11 kDA(-cTP )
PI	8.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (M&Skoog))
16502469(cell suspension-CD-down)

Comparative Proteomics Data