PPDB

 The Plant Proteome Database

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AT1G34380.1   5'-3' exonuclease family protein
Lab Annot. 5'-3' exonuclease protein
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G34380.2 11Arabidopsis thaliana02411001000 (0)C
AT1G34380.3 11Arabidopsis thaliana02411001000 (0)C
AT3G52050.5 11Arabidopsis thaliana8E-1114827471 (0)M
Os01g65400.5 7Oryza sativa9E-7518658766 (6)C
Os01g65400.3 7Oryza sativa1E-7418658766 (6)C
Os01g65400.4 7Oryza sativa1E-7418658766 (6)C
Zm00001eb146190_P002 agpv5Zea mays3E-7118259760 (0)C
GRMZM2G081519_P01 3.21Zea mays3E-7118259766 (6)C
v1_GRMZM2G081519_P01 4a53Zea mays3E-7118259765 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 5_3_exonuc_N(1) DUF2726(1) DUF4734(1)
TargetP: Chloroplast (Class 1 C0.930; M0.033; S0.026; _0.085)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 264 aa (-cTP 203) (-lTP 150)
Molecular Weight 30.14 kDA(-cTP 23.39)(-lTP 17.38)
PI 9.15(-cTP 8.83)(-lTP 8.859)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help