PPDB

The Plant Proteome Database

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AT1G34220.1   Regulator of Vps4 activity in the MVB pathway protein

Lab Annot. Regulator of Vps4 activity in the MVB pathway protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G34220.2 11Arabidopsis thaliana0649959539 (9)_
AT1G25420.1 11Arabidopsis thaliana5E-7523650670 (0)M
AT4G35730.1 11Arabidopsis thaliana7E-7523949670 (0)C
Os08g07830.1 7Oryza sativa2E-11028361742 (2)_
Os01g49350.1 7Oryza sativa2E-7924651670 (0)M
Os08g07830.2 7Oryza sativa3E-7422956690 (0)S
GRMZM2G106590_P02 3.21Zea mays2E-11952646580 (0)_
Zm00001eb414760_P001 agpv5Zea mays2E-11952646580 (0)_
v1_GRMZM2G106590_P02 4a53Zea mays2E-11952646580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ist1(2)
TargetP: Cytoplasm (Class 5 C0.083; M0.323; S0.015; _0.387)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 649 aa (-cTP 617)
Molecular Weight 72.57 kDA(-cTP )
PI 5.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  
2287Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help