PPDB

 The Plant Proteome Database

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AT1G34140.1   poly(A) binding protein 1
Lab Annot.
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71770.1 11Arabidopsis thaliana5E-12142046620 (0)_
AT1G71770.2 11Arabidopsis thaliana5E-12142046620 (0)_
AT4G34110.1 11Arabidopsis thaliana1E-1163934865384 (138)_
Os09g02700.1 7Oryza sativa2E-118405486451 (51)C
Os08g22354.2 7Oryza sativa5E-115404476534 (34)S
Os08g22354.1 7Oryza sativa5E-115404476534 (34)_
Zm00001eb095540_P002 agpv5Zea mays7E-12140848660 (0)_
v1_GRMZM2G102829_P01 4a53Zea mays7E-1214084866113 (113)_
GRMZM2G102829_P01 3.21Zea mays7E-1214084866171 (98)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Limkain-b1(3) RRM_1(3) RRM_occluded(2)
TargetP: Cytoplasm (Class 4 C0.053; M0.323; S0.070; _0.625)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 407 aa (-cTP 343)
Molecular Weight 45.90 kDA(-cTP )
PI 9.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(80S polysomal fraction)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help