PPDB

 The Plant Proteome Database

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AT1G33811.1   GDSL-like Lipase/Acylhydrolase superfamily protein
Lab Annot. GDSL-motif lipase/hydrolase protein
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45670.1 11Arabidopsis thaliana2E-12737051671 (1)S
AT1G29670.1 11Arabidopsis thaliana5E-1253605168466 (234)S
AT4G18970.1 11Arabidopsis thaliana2E-12434153696 (6)S
Os01g52770.1 7Oryza sativa9E-127342526915 (15)S
Os01g54470.1 7Oryza sativa2E-12334452680 (0)C
Os05g44200.1 7Oryza sativa2E-118340516911 (11)S
v1_GRMZM2G478414_P02 4a53Zea mays8E-128368506717 (17)S
v1_GRMZM2G478414_P01 4a53Zea mays8E-128368506717 (17)S
Zm00001eb154280_P001 agpv5Zea mays8E-12836850670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 2 C0.003; M0.182; S0.951; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 314)
Molecular Weight 41.70 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help