PPDB

 The Plant Proteome Database

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AT1G33780.1   electron transporter%2C putative (DUF179)
Lab Annot. DUF179-1
Mapman: 35.2 not assigned.unknown
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G29240.2 11Arabidopsis thaliana8E-572424458345 (68)C
AT3G29240.1 11Arabidopsis thaliana8E-572424458345 (68)C
AT3G19780.3 11Arabidopsis thaliana4E-1416532480 (0)M
Os05g34720.1 7Oryza sativa2E-8127548650 (0)M
Os01g66280.1 7Oryza sativa7E-7823550680 (0)C
Os10g18370.1 7Oryza sativa1E-5724845600 (0)C
GRMZM2G050693_P01 3.21Zea mays3E-8328246640 (0)M
Zm00001eb366020_P003 agpv5Zea mays3E-8328246640 (0)M
v1_GRMZM2G050693_P01 4a53Zea mays3E-8328246640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF179(1)
TargetP: Chloroplast (Class 4 C0.731; M0.111; S0.003; _0.393)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 269) (-lTP 253)
Molecular Weight 36.39 kDA(-cTP 29.83)(-lTP 28.28)
PI 6.63(-cTP 5.64)(-lTP 5.779)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
1292Detail       leaf [A. thaliana] co-IP cGEP (rep. 1) stromawild-type
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1635Detail       leaf [A. thaliana] Stroma stromaclpt1-2
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2265Detail       leaf [A. thaliana] stroma Clp stromaClp C1 trap
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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