PPDB

 The Plant Proteome Database

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AT1G33610.1   Leucine-rich repeat (LRR) family protein
Lab Annot. leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G33590.3 11Arabidopsis thaliana047870790 (0)_
AT1G33590.2 11Arabidopsis thaliana047870790 (0)_
AT1G33590.1 11Arabidopsis thaliana04787079430 (272)S
Os04g58080.1 7Oryza sativa3E-5650729460 (0)S
Os03g21730.1 7Oryza sativa1E-4946330480 (0)S
Os02g06600.1 7Oryza sativa5E-4745830460 (0)S
GRMZM2G008583_P01 3.21Zea mays1E-6347530500 (0)M
Zm00001eb433730_P001 agpv5Zea mays1E-6347530500 (0)M
v1_GRMZM2G008583_P01 4a53Zea mays1E-6347530500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LRR_1(10) LRR_2(3) LRR_4(13) LRR_6(9) LRR_8(7) LRRNT_2(1)
TargetP: Secreted (Class 1 C0.011; M0.012; S0.938; _0.064)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 478 aa (-cTP 381)
Molecular Weight 52.67 kDA(-cTP )
PI 8.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help