PPDB

 The Plant Proteome Database

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AT1G33330.1   Class I peptide chain release factor
Lab Annot. Peptidyl-tRNA hydrolase
Mapman: 29.2.5 protein.synthesis.release
Curated Location plastid nucleoid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G33330.3 11Arabidopsis thaliana02571001000 (0)M
AT1G33330.2 11Arabidopsis thaliana02571001000 (0)M
AT1G56350.1 11Arabidopsis thaliana1E-115655690 (0)M
Os01g66379.1 7Oryza sativa2E-7917069833 (3)M
Os03g19300.1 7Oryza sativa8E-125655710 (0)M
Os05g19630.1 7Oryza sativa5E-106744650 (0)_
Zm00001eb145380_P003 agpv5Zea mays2E-8317470850 (0)M
GRMZM2G081077_P02 3.21Zea mays2E-83174708513 (11)M
v1_GRMZM2G081077_P02 4a53Zea mays2E-83174708511 (11)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HTH_8(1) RF-1(1)
TargetP: Mitochondria (Class 4 C0.200; M0.562; S0.131; _0.002)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 257 aa (-cTP 197)
Molecular Weight 27.65 kDA(-cTP )
PI 10.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
326Detail       leaf [A. thaliana] chloroplast stromawild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)

Comparative Proteomics Data

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