PPDB

 The Plant Proteome Database

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AT1G33230.1   TMPIT-like protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10430.1 11Arabidopsis thaliana034584911 (1)_
AT4G10430.3 11Arabidopsis thaliana034584911 (1)_
AT1G33230.2 11Arabidopsis thaliana028498990 (0)_
Os02g01720.1 7Oryza sativa1E-15532465830 (0)C
Os08g05660.1 7Oryza sativa8E-14432963750 (0)_
GRMZM2G154328_P01 3.21Zea mays9E-16433069811 (1)_
v1_GRMZM2G154328_P01 4a53Zea mays9E-16433069812 (2)_
Zm00001eb416220_P001 agpv5Zea mays9E-16433069810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1087(1) ORF6C(1) TMPIT(1)
TargetP: Cytoplasm (Class 3 C0.275; M0.146; S0.010; _0.698)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 347 aa (-cTP 308)
Molecular Weight 40.01 kDA(-cTP )
PI 9.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help