PPDB

 The Plant Proteome Database

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AT1G33040.1   nascent polypeptide-associated complex subunit alpha-like protein 5
Lab Annot. nascent polypeptide-associated complex (NAC) domain-containing protein
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10480.2 11Arabidopsis thaliana1E-862137489128 (90)_
AT4G10480.1 11Arabidopsis thaliana4E-862147489149 (102)_
AT3G49470.1 11Arabidopsis thaliana4E-712156180146 (84)_
Os05g31000.1 7Oryza sativa4E-68162658457 (57)_
Os01g71230.1 7Oryza sativa7E-67161638562 (62)_
Os01g71230.2 7Oryza sativa5E-66159638462 (62)_
Zm00001eb016960_P001 agpv5Zea mays2E-6915168890 (0)_
GRMZM2G000923_P02 3.21Zea mays2E-69151688984 (83)_
v1_GRMZM2G000923_P02 4a53Zea mays2E-69151688993 (93)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CENP-B_dimeris(2) DUF4637(2) DUF5000(1) HYPK_UBA(1) NAC(3) PBP1_TM(2)
TargetP: Cytoplasm (Class 1 C0.106; M0.055; S0.103; _0.947)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 209 aa (-cTP 203)
Molecular Weight 22.78 kDA(-cTP )
PI 4.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help