PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G32940.1   Subtilase family protein

Lab Annot. subtilase SBT3.5 (target proPME)
Mapman: 29.5.5.4.1* protein.degradation.serine protease.SB.S8
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32940.2 11Arabidopsis thaliana07231001000 (0)_
AT1G32940.4 11Arabidopsis thaliana07231001000 (0)_
AT1G32960.1 11Arabidopsis thaliana075383900 (0)S
Os09g36110.1 7Oryza sativa077547670 (0)S
Os01g58290.1 7Oryza sativa076946620 (0)S
Os01g58240.1 7Oryza sativa078245610 (0)S
v1_GRMZM2G145589_P01 4a53Zea mays0807456139 (39)M
Zm00001eb283230_P002 agpv5Zea mays080745610 (0)M
Zm00001eb283230_P001 agpv5Zea mays080844610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: fn3_6(1) HAP2-GCS1(1) Inhibitor_I9(1) PA(2) Peptidase_S8(1)
TargetP: Secreted (Class 2 C0.003; M0.252; S0.970; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 774 aa (-cTP 674)
Molecular Weight 82.91 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help