PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G32860.1   Glycosyl hydrolase superfamily protein
Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42100.1 11Arabidopsis thaliana2E-159335657716 (10)S
AT5G42100.2 11Arabidopsis thaliana2E-159335657716 (10)S
AT2G27500.2 11Arabidopsis thaliana2E-13932157760 (0)S
Os04g33640.1 7Oryza sativa4E-14034755730 (0)_
Os04g33640.2 7Oryza sativa4E-14034755730 (0)_
Os01g64170.3 7Oryza sativa2E-13433855732 (2)S
GRMZM2G127117_P02 3.21Zea mays5E-13834355740 (0)S
GRMZM2G019619_P01 3.21Zea mays4E-13332058750 (0)M
Zm00001eb083870_P001 agpv5Zea mays4E-13332355740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_17(1)
TargetP: Secreted (Class 1 C0.007; M0.035; S0.945; _0.084)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 426 aa (-cTP 422)
Molecular Weight 45.42 kDA(-cTP )
PI 7.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
17317660(Plasma Membrane proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help