PPDB

The Plant Proteome Database

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AT1G32790.1   CTC-interacting domain 11

Lab Annot. RRM domain CTC-interacting domain 11
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32790.2 11Arabidopsis thaliana034299990 (0)C
AT4G10610.1 11Arabidopsis thaliana4E-18036074810 (0)_
AT4G10610.2 11Arabidopsis thaliana2E-16934173810 (0)_
Os08g02330.1 7Oryza sativa2E-14528772820 (0)_
Os01g11120.1 7Oryza sativa3E-11928263731 (1)_
Os06g35030.3 7Oryza sativa1E-11231458680 (0)S
GRMZM2G173428_P01 3.21Zea mays1E-14129667781 (1)_
v1_GRMZM2G173428_P01 4a53Zea mays1E-14129667780 (0)_
Zm00001eb260870_P005 agpv5Zea mays5E-14129368770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAM2(1) RRM_1(3) RRM_occluded(2)
TargetP: Chloroplast (Class 5 C0.513; M0.045; S0.214; _0.337)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 358 aa (-cTP 329)
Molecular Weight 38.95 kDA(-cTP 36.32)
PI 7.05(-cTP 8.14)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help