PPDB

The Plant Proteome Database

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AT1G32540.2   lsd one like 1

Lab Annot. specific zinc finger domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32540.3 11Arabidopsis thaliana2E-1081541001000 (0)C
AT1G32540.1 11Arabidopsis thaliana3E-891281001000 (0)S
AT1G32540.5 11Arabidopsis thaliana2E-831391001000 (0)C
Os08g06280.3 7Oryza sativa2E-7314579820 (0)C
Os08g06280.7 7Oryza sativa3E-7214381830 (0)C
Os08g06280.6 6Oryza sativa3E-7214381830 (0)C
Zm00001eb172290_P001 agpv5Zea mays2E-7111789940 (0)C
v1_GRMZM2G055135_P07 4a53Zea mays2E-7111789940 (0)C
v1_GRMZM2G055135_P03 4a53Zea mays2E-7111789940 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Mu-like_Com(3) SE(2) zf-LSD1(3)
TargetP: Chloroplast (Class 4 C0.552; M0.061; S0.015; _0.317)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 154 aa (-cTP 97)
Molecular Weight 15.87 kDA(-cTP 10.17)
PI 7.92(-cTP 7.67)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help