PPDB

PPDB	The Plant Proteome Database

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AT1G32530.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G35330.1 11 Arabidopsis thaliana 0 725 66 78 0 (0) S
AT2G35330.2 11 Arabidopsis thaliana 0 725 66 78 0 (0) _
AT4G03000.1 11 Arabidopsis thaliana 3E-44 407 30 53 1 (1) _
Os09g20550.1 7 Oryza sativa 1E-99 657 33 52 0 (0) M
Os05g04950.1 7 Oryza sativa 1E-46 352 31 56 0 (0) C
Os05g04950.2 7 Oryza sativa 1E-46 352 31 56 0 (0) C
GRMZM2G108546_P01 3.21 Zea mays 2E-64 392 36 58 0 (0) M
v1_GRMZM2G108546_P01 4a53 Zea mays 2E-64 392 36 58 0 (0) M
Zm00001eb311380_P001 agpv5 Zea mays 2E-64 392 36 58 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MitMem_reg(2) Prok-RING_4(1) UBA(1) zf-C3HC4(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RI
TargetP:	Mitochondria (Class 5 C0.083; M0.435; S0.061; _0.412)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	711 aa (-cTP 694)
Molecular Weight	79.33 kDA(-cTP )
PI	6.05(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)

Comparative Proteomics Data